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object --+ | System
Abstraction for a collection of reactions.
This class is used in the Bio.Pathway framework to represent an arbitrary collection of reactions without explicitly defined links.
Attributes:
None
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Inherited from |
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Inherited from |
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Initializes a new System object.
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Returns a debugging string representation of self.
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Returns a string representation of self.
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Computes the stoichiometry matrix for self. Returns (species, reactions, stoch) where species = ordered list of species in this system reactions = ordered list of reactions in this system stoch = 2D array where stoch[i][j] is coef of the jth species in the ith reaction, as defined by species and reactions above |
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