Breaks seqXML file into SeqRecords.
Assumes valid seqXML please validate beforehand.
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_attr_seqXML(self,
attr_dict,
record)
Parse the document metadata. |
source code
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_attr_property(self,
attr_dict,
record)
Parse key value pair properties and store them as annotations. |
source code
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_attr_species(self,
attr_dict,
record)
Parse the species information. |
source code
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_attr_entry(self,
attr_dict,
record)
New entry set id and the optional entry source. |
source code
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_elem_DNAseq(self,
node,
record)
Parse DNA sequence. |
source code
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_elem_RNAseq(self,
node,
record)
Parse RNA sequence. |
source code
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_elem_AAseq(self,
node,
record)
Parse protein sequence. |
source code
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_elem_description(self,
node,
record)
Parse the description. |
source code
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_attr_DBRef(self,
attr_dict,
record)
Parse a database cross reference |
source code
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Inherited from XMLRecordIterator :
__iter__
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