Package Bio :: Package SeqUtils :: Module ProtParam
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Module ProtParam

source code

Simple protein analysis.

Example,

X = ProteinAnalysis("MAEGEITTFTALTEKFNLPPGNYKKPKLLYCSNGGHFLRILPDGTVDGTRDRSDQHIQLQLSAESVGEVYIKSTETGQYLAMDTSGLLYGSQTPSEECLFLERLEENHYNTYTSKKHAEKNWFVGLKKNGSCKRGPRTHYGQKAILFLPLPV") print X.count_amino_acids() print X.get_amino_acids_percent() print X.molecular_weight() print X.aromaticity() print X.instability_index() print X.flexibility() print X.isoelectric_point() print X.secondary_structure_fraction() print X.protein_scale(ProtParamData.kd, 9, 0.4)

Classes [hide private]
  ProteinAnalysis
Class containing methods for protein analysis.
Variables [hide private]
  __package__ = 'Bio.SeqUtils'