Package Bio :: Package Parsers :: Module spark
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Module spark

source code

Copy of John Aycock's SPARK parser included with Biopython (DEPRECATED).

To clarify, when we say deprecated we just mean to warn you that Biopython will in a future release no longer include this module. This does not affect the status of John Aycock's SPARK parser which can be installed separately from: http://pages.cpsc.ucalgary.ca/~aycock/spark/

Biopython included this copy of SPARK purely for parsing GenBank/EMBL feature location strings using Bio.GenBank.LocationParser, and that code has now been replaced with something simpler and faster using regular expressions.


Version: SPARK-0.6.1

Classes [hide private]
  GenericScanner
  GenericParser
  GenericASTBuilder
  GenericASTTraversalPruningException
  GenericASTTraversal
  GenericASTMatcher
Functions [hide private]
 
_namelist(instance) source code
 
_dump(tokens, states) source code
Variables [hide private]
  __package__ = 'Bio.Parsers'