Affymetrix Human Genome U133 Set annotation data (chip hgu133a)


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Documentation for package ‘hgu133a.db’ version 2.6.3

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hgu133a Bioconductor annotation data package
hgu133a.db Bioconductor annotation data package
hgu133aACCNUM Map Manufacturer identifiers to Accession Numbers
hgu133aALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
hgu133aCHR Map Manufacturer IDs to Chromosomes
hgu133aCHRLENGTHS A named vector for the length of each of the chromosomes
hgu133aCHRLOC Map Manufacturer IDs to Chromosomal Location
hgu133aCHRLOCEND Map Manufacturer IDs to Chromosomal Location
hgu133aENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
hgu133aENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
hgu133aENTREZID Map between Manufacturer Identifiers and Entrez Gene
hgu133aENZYME Map between Manufacturer IDs and Enzyme Commission (EC) Numbers
hgu133aENZYME2PROBE Map between Enzyme Commission Numbers and Manufacturer Identifiers
hgu133aGENENAME Map between Manufacturer IDs and Genes
hgu133aGO Map between Manufacturer IDs and Gene Ontology (GO)
hgu133aGO2ALLPROBES Map between Gene Ontology (GO) Identifiers and all Manufacturer Identifiers in the subtree
hgu133aGO2PROBE Map between Gene Ontology (GO) and Manufacturer Identifiers
hgu133aLOCUSID Map between Manufacturer Identifiers and Entrez Gene
hgu133aMAP Map between Manufacturer Identifiers and cytogenetic maps/bands
hgu133aMAPCOUNTS Number of mapped keys for the maps in package hgu133a.db
hgu133aOMIM Map between Manufacturer Identifiers and Mendelian Inheritance in Man (MIM) identifiers
hgu133aORGANISM The Organism information for hgu133a
hgu133aORGPKG The Organism information for hgu133a
hgu133aPATH Mappings between probe identifiers and KEGG pathway identifiers
hgu133aPATH2PROBE Map between Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway identifiers and Manufacturer Identifiers
hgu133aPFAM Map Manufacturer IDs to Pfam IDs
hgu133aPMID Map between Manufacturer Identifiers and PubMed Identifiers
hgu133aPMID2PROBE Map between PubMed Identifiers and Manufacturer Identifiers
hgu133aPROSITE Map Manufacturer IDs to PROSITE ID
hgu133aREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
hgu133aSYMBOL Map between Manufacturer Identifiers and Gene Symbols
hgu133aUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
hgu133aUNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
hgu133aUNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
hgu133a_dbconn Collect information about the package annotation DB
hgu133a_dbfile Collect information about the package annotation DB
hgu133a_dbInfo Collect information about the package annotation DB
hgu133a_dbschema Collect information about the package annotation DB