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PySB Modules ReferenceΒΆ

  • PySB core (pysb.core)
  • ODE integrators (pysb.integrate)
  • BioNetGen integration (pysb.bng)
  • Kappa integration (pysb.kappa)
  • Macros (pysb.macros)
  • Visualizing model structure
    • Render a model’s reaction network (pysb.tools.render_reactions)
    • Render a model’s species (pysb.tools.render_species)
  • Exporting to other formats (pysb.export)

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