CIPChirality |
A fully validated relatively efficient implementation of Cahn-Ingold-Prelog
rules for assigning R/S, M/P, and E/Z stereochemical descriptors.
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CIPData |
A helper class to handle application-specific analysis and store
information needed by CIPChirality and CIPDataSmiles.
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CIPDataSmiles |
A subclass that allows Jmol processing of SMILES using
"...smiles...".find("SMILES","chirality")
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CIPDataTracker |
An optional class to track digraph paths to decisions.
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HallInfo |
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HallRotation |
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HallRotationTerm |
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HallTranslation |
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PointGroup |
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SpaceGroup |
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Symmetry |
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SymmetryDesc |
A class to handle requests for information about space groups and symmetry
operations.
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SymmetryInfo |
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SymmetryOperation |
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UnitCell |
a class private to the org.jmol.symmetry package
to be accessed only through the SymmetryInterface API
adds vertices and offsets orientation,
and a variety of additional calculations that in
principle could be put in SimpleUnitCell
if desired, but for now are in this optional package.
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UnitCellIterator |
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